API Reference

This is the class and function reference of stabilized-ica.

sica.base: Main class and function

base.StabilizedICA

Implement a stabilized version of the Independent Component Analysis algorithm.

base.MSTD(X, m, M, step, n_runs[, fun, ...])

Plot "MSTD graphs" to help choose an optimal dimension for ICA decomposition.

sica.mutualknn: Mutual K-Nearest Neighbors

mutualknn.MNN(k, metric, X[, Y])	Given two arrays X and Y or a precomputed distance matrix computes the undirected adjacency matrix using the Mutual Nearest Neighbors method.
mutualknn.MNNgraph(data, names, k[, metric, ...])	Given a list of data sets, draws the MNN graph with a networkx object (compatible with the software Cytoscape)