About us¶
SysBio group¶
The Computational Systems Biology of Cancer group (SysBio) is a team of researchers from various disciplines (mathematics, physics, biology, computer science) of Institut Curie, working together on answering major questions of cancer biology.
One of our objectives is to develop computational methods to deal with omics data and unravel relevant biological insights. The team has worked on the application of Independent Component Analysis to omics data for many years. The stabilized-ica project enriches the set of tools that have already been developped and will make the integration of ICA in our python projects more straightforward.
Contributors¶
Nicolas Captier
Andrei Zinovyev
Aziz Fouché
Nicolas Sompairac
Citing stabilized-ica¶
stabilized-ica is included into BIODICA, a computational environment for application of independent component analysis (ICA) to bulk and single-cell molecular profiles, interpretation of the results in terms of biological functions and correlation with metadata. We would appreciate citation to the following paper:
Nicolas Captier, Jane Merlevede, Askhat Molkenov, Ainur Seisenova, Altynbek Zhubanchaliyev, Petr V Nazarov, Emmanuel Barillot, Ulykbek Kairov, Andrei Zinovyev, BIODICA: a computational environment for Independent Component Analysis of omics data, Bioinformatics, Volume 38, Issue 10, 15 May 2022, Pages 2963–2964, https://doi.org/10.1093/bioinformatics/btac204
Contact us¶
If you have any question or remark about stabilized-ica please raise an issue on GitHub or send us an email.
contact : nicolas.captier@curie.fr